recipe kraken-ea

Kraken is a system for assigning taxonomic labels to short DNA sequences, usually obtained through metagenomic studies. This is a modified version allowing for splitting of fastq files based on read classifications.

Homepage

https://github.com/ExpressionAnalysis/kraken/tree/v0.10.5-beta-ea.2

License

GPLv3

Recipe

/kraken-ea/meta.yaml

package kraken-ea

(downloads) docker_kraken-ea

Versions

0.10.5ea.3-3, 0.10.5ea.3-2, 0.10.5ea.3-1, 0.10.5ea.3-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install kraken-ea

and update with:

conda update kraken-ea

or use the docker container:

docker pull quay.io/biocontainers/kraken-ea:<tag>

(see kraken-ea/tags for valid values for <tag>)