lofreq

downloads

A fast and sensitive variant-caller for inferring SNVs and indels from next-generation sequencing data

Home http://csb5.github.io/lofreq/
Versions 2.1.2, 2.1.3.1
License MIT
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/lofreq

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install lofreq

and update with:

conda update lofreq

docker

A Docker container is available at https://quay.io/repository/biocontainers/lofreq.