recipe mashtree

Create a tree using Mash distances

Homepage

https://github.com/lskatz/mashtree

License

GPL-3.0

Recipe

/mashtree/meta.yaml

package mashtree

Versions

1.2.0-0,  1.1.2-0,  1.1-0,  1.0.4-0,  1.0.1-0,  1.0-0,  0.57-1,  0.57-0,  0.55-0, 

1.2.0-0,  1.1.2-0,  1.1-0,  1.0.4-0,  1.0.1-0,  1.0-0,  0.57-1,  0.57-0,  0.55-0,  0.37-0,  0.36-0,  0.35.4-0,  0.30-2,  0.30-0,  0.28-0,  0.26-0,  0.25-0,  0.21-0,  0.20-0,  0.12-0

Depends

• libgcc-ng >=7.5.0

• mash >=1.1

• perl >=5.26.2,<5.26.3.0a0

• perl-bioperl >=1.7.2

• perl-dbd-sqlite >=1.58

• quicktree

• sqlite >=3.33.0,<4.0a0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install mashtree

and update with:

conda update mashtree

or use the docker container:

docker pull quay.io/biocontainers/mashtree:<tag>

(see mashtree/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/mashtree/README.html)