recipe mashtree

Create a tree using Mash distances

Homepage

https://github.com/lskatz/mashtree

License

GPL-3.0

Recipe

/mashtree/meta.yaml

package mashtree

Versions

0.37-0, 0.36-0, 0.35.4-0, 0.30-2, 0.30-0, 0.28-0, 0.26-0, 0.25-0, 0.21-0, 0.20-0, 0.12-0

Depends

• libgcc-ng >=4.9

• mash >=1.1

• perl >=5.26.2,<5.26.3.0a0

• perl-bioperl >=1.7.2

• perl-dbd-sqlite >=1.58

• quicktree

• sqlite >=3.26.0,<4.0a0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install mashtree

and update with:

conda update mashtree

or use the docker container:

docker pull quay.io/biocontainers/mashtree:<tag>

(see mashtree/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/mashtree/README.html)