- recipe megahit
MEGAHIT: An ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph
- Homepage:
- License:
GPL / GPL-3.0
- Recipe:
- Links:
biotools: megahit, doi: 10.1093/bioinformatics/btv033
- package megahit¶
-
- Versions:
1.2.9-2
,1.2.9-1
,1.2.9-0
,1.2.8-0
,1.2.7-0
,1.2.6-0
,1.1.3-0
,1.1.2-1
,1.1.2-0
,1.2.9-2
,1.2.9-1
,1.2.9-0
,1.2.8-0
,1.2.7-0
,1.2.6-0
,1.1.3-0
,1.1.2-1
,1.1.2-0
,1.1.1-0
,1.0.6-1
,1.0.3-1
,1.0.3-0
- Depends:
libgcc-ng
>=12
libstdcxx-ng
>=12
libzlib
>=1.2.13,<1.3.0a0
zlib
>=1.2.13,<1.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install megahit
and update with:
conda update megahit
or use the docker container:
docker pull quay.io/biocontainers/megahit:<tag>
(see megahit/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/megahit/README.html)