recipe megahit

MEGAHIT: An ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph

Homepage:

https://github.com/voutcn/megahit

License:

GPL / GPL-3.0

Recipe:

/megahit/meta.yaml

Links:

biotools: megahit, doi: 10.1093/bioinformatics/btv033

package megahit

(downloads) docker_megahit

Versions:
1.2.9-21.2.9-11.2.9-01.2.8-01.2.7-01.2.6-01.1.3-01.1.2-11.1.2-0

1.2.9-21.2.9-11.2.9-01.2.8-01.2.7-01.2.6-01.1.3-01.1.2-11.1.2-01.1.1-01.0.6-11.0.3-11.0.3-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install megahit

and update with:

conda update megahit

or use the docker container:

docker pull quay.io/biocontainers/megahit:<tag>

(see megahit/tags for valid values for <tag>)

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