recipe merfishtools

MERFISHtools implement a Bayesian framework for accurately predicting gene or transcript expression from MERFISH data. On top, differential expression analysis can be performed for two or multiple conditions, including credible intervals for fold change and coefficient of variation, and controlling the expected false discovery rate.

Homepage

https://merfishtools.github.io

License

MIT

Recipe

/merfishtools/meta.yaml

package merfishtools

(downloads) docker_merfishtools

Versions

1.5.0-0, 1.4.0-0, 1.3.0-3, 1.3.0-2, 1.3.0-1, 1.2.0-1, 1.1.0-1, 1.0.0-1, 0.9.1-1, 0.9.1-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install merfishtools

and update with:

conda update merfishtools

or use the docker container:

docker pull quay.io/biocontainers/merfishtools:<tag>

(see merfishtools/tags for valid values for <tag>)