- recipe metawatt
MetaWatt is a metagenomic binning tool
- Homepage:
- License:
AFL
- Recipe:
- Links:
The Metawatt binner is a graphical binning tool that makes use of multivariate statistics of tetranucleotide frequencies and differential coverage based binning. It also performs taxonomic assessment of binning quality (via diamond BLASTx). Created bins can be edited and exported as fasta. The Metawatt is implemented in Java SWING and minimally depends on Diamond, HMMer3.1, BBMap, Prodigal and the Batik library for the export of SVG graphics.
- package metawatt¶
-
- Versions:
3.5.3-3
,3.5.3-2
,3.5.3-1
,3.5.3-0
- Depends:
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install metawatt
and update with:
conda update metawatt
or use the docker container:
docker pull quay.io/biocontainers/metawatt:<tag>
(see metawatt/tags for valid values for
<tag>
)
Notes¶
metawatt --help
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/metawatt/README.html)