recipe misopy

Mixture of Isoforms model (MISO) for isoform quantitation using RNA-Seq

Homepage

http://genes.mit.edu/burgelab/miso/

License

GPL2 / GPL2

Recipe

/misopy/meta.yaml

package misopy

Versions

0.5.4-2,  0.5.4-1,  0.5.4-0

Depends

• bedtools

• libgcc-ng >=7.3.0

• matplotlib

• numpy >=1.5.0

• pysam >=0.6.0

• python >=2.7,<2.8.0a0

• samtools <=1.2

• scipy >=0.9.0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install misopy

and update with:

conda update misopy

or use the docker container:

docker pull quay.io/biocontainers/misopy:<tag>

(see misopy/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/misopy/README.html)