recipe misopy

Mixture of Isoforms model (MISO) for isoform quantitation using RNA-Seq

Homepage:

http://genes.mit.edu/burgelab/miso/

License:

GPL2 / GPL2

Recipe:

/misopy/meta.yaml

package misopy

Versions:

0.5.4-5,  0.5.4-4,  0.5.4-3,  0.5.4-2,  0.5.4-1,  0.5.4-0

Depends:

• bedtools

• libgcc-ng >=10.3.0

• matplotlib

• numpy >=1.5.0

• pysam >=0.6.0

• python >=2.7,<2.8.0a0

• python_abi 2.7.* *_cp27mu

• samtools <=1.2

• scipy >=0.9.0

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install misopy

and update with:

conda update misopy

or use the docker container:

docker pull quay.io/biocontainers/misopy:<tag>

(see misopy/tags for valid values for <tag>)

Download stats

Link to this page

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