mlst

downloads

Scan contig files against PubMLST typing schemes

Home https://github.com/tseemann/mlst
Versions 2.16.1, 2.16, 2.15.2, 2.15.1, 2.15, 2.14, 2.13, 2.12, 2.11, 2.10, 2.9, 2.6
License GPL-2.0
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/mlst
Links biotools: mlst

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install mlst

and update with:

conda update mlst

docker

A Docker container is available at https://quay.io/repository/biocontainers/mlst.