recipe moabs

Methylation analysis on Bisulfite-Sequencing reads

Homepage

https://github.com/sunnyisgalaxy/moabs

License

MIT

Recipe

/moabs/meta.yaml

Links

doi: 10.1021/acs.jproteome.8b00708, usegalaxy-eu: moabs

package moabs

Versions

1.3.9.6-2,  1.3.9.6-1,  1.3.9.6-0,  1.3.9.5-0,  1.3.9.4-0,  1.3.9.3-0,  1.3.9.2-0,  1.3.9.0-0,  1.3.8.9-0, 

1.3.9.6-2,  1.3.9.6-1,  1.3.9.6-0,  1.3.9.5-0,  1.3.9.4-0,  1.3.9.3-0,  1.3.9.2-0,  1.3.9.0-0,  1.3.8.9-0,  1.3.8.8-0,  1.3.8.7-0,  1.3.8.6-1,  1.3.8.6-0,  1.3.8.5-0,  1.3.8.4-2,  1.3.8.4-1,  1.3.8.4-0,  1.3.8.2-0,  1.3.8.1-1,  1.3.8.1-0,  1.3.7.9-1,  1.3.7.9-0,  1.3.7.8-0,  1.3.7.7-0,  1.3.7.6-0,  1.3.7.5-0,  1.3.4.6-0,  1.3.4.5-1,  1.3.4.5-0,  1.3.4-0

Depends

• boost-cpp >=1.70.0,<1.70.1.0a0

• libgcc-ng >=7.5.0

• libis >=0.0.9

• libstdcxx-ng >=7.5.0

• ncurses >=6.1,<6.2.0a0

• perl >=5.26.2,<5.26.3.0a0

• perl-config-simple

• r-base >=4.0,<4.1.0a0

• r-ggplot2

• r-gridextra

• wget

• zlib >=1.2.11,<1.3.0a0

Required By

• libis

• cmsip

• hamip

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install moabs

and update with:

conda update moabs

or use the docker container:

docker pull quay.io/biocontainers/moabs:<tag>

(see moabs/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/moabs/README.html)