- recipe mtbseq
Pipeline for WGS analysis of M. tuberculosis
- Homepage:
- License:
GPLv3
- Recipe:
MTBseq is a semi-automated pipeline for mapping, variant calling and detection of resistance mediating and phylogenetic variants from Illumina whole genome sequence data of Mycobacterium tuberculosis complex isolates
- package mtbseq¶
-
- Versions:
1.0.4-2
,1.0.4-1
,1.0.4-0
,1.0.3-1
,1.0.3-0
- Depends:
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install mtbseq
and update with:
conda update mtbseq
or use the docker container:
docker pull quay.io/biocontainers/mtbseq:<tag>
(see mtbseq/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/mtbseq/README.html)