recipe muscle

MUSCLE: multiple sequence alignment with high accuracy and high throughput

Homepage:

https://github.com/rcedgar/muscle

License:

GPL-3.0-only

Recipe:

/muscle/meta.yaml

Links:

biotools: muscle

package muscle

Versions:

5.1-3,  5.1-2,  5.1-1,  5.1-0,  3.8.1551-6,  3.8.1551-5,  3.8.1551-4,  3.8.1551-3,  3.8.1551-2, 

5.1-3,  5.1-2,  5.1-1,  5.1-0,  3.8.1551-6,  3.8.1551-5,  3.8.1551-4,  3.8.1551-3,  3.8.1551-2,  3.8.1551-1,  3.8.31-0

Depends:

• libgcc-ng >=12

• libstdcxx-ng >=12

Required By:

• presto

• igdiscover

• artic

• arb-bio

• orthofinder

• batch_brb

• antismash

• phame

• samestr

• secapr

• ghost-tree

• eden

• phylophlan

• snostrip

• srax

• centreseq

• ipyrad

• pifcosm

• vcfkit

• irma

• t-coffee

• advntr

• bleties

• edta

• antismash-lite

• metaphlan

• pgcgap

• wgdi

• zol

• gtotree

• crabs

• pyrad

• trycycler

• captus

• translatorx

• nanocaller

• anvio

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install muscle

and update with:

conda update muscle

or use the docker container:

docker pull quay.io/biocontainers/muscle:<tag>

(see muscle/tags for valid values for <tag>)

Download stats

Link to this page

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