recipe nanocomp

Comparing runs of Oxford Nanopore sequencing data and alignments

Homepage

https://github.com/wdecoster/NanoComp

License

MIT / MIT License

Recipe

/nanocomp/meta.yaml

package nanocomp

Versions

1.10.1-0, 1.10.0-0, 1.9.2-1, 1.9.2-0, 1.9.1-0, 1.9.0-0, 1.8.0-0, 1.7.0-0, 1.6.0-0, 1.1.0-1, 1.1.0-0, 1.0.0-0, 0.23.1-0, 0.23.0-1, 0.19.0-1, 0.19.0-0, 0.16.0-0, 0.15.0-0, 0.12.4-0, 0.7.0-0, 0.5.0-0

Depends

• joypy

• nanoget >=1.12.0

• nanomath >=0.15.3

• nanoplot >=1.28.1

• numpy

• orca

• pandas

• plotly >=4.1.1

• pysam >=0.15

• python >=3

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install nanocomp

and update with:

conda update nanocomp

or use the docker container:

docker pull quay.io/biocontainers/nanocomp:<tag>

(see nanocomp/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/nanocomp/README.html)