recipe nanocomp

Comparing runs of Oxford Nanopore sequencing data and alignments

Homepage

https://github.com/wdecoster/NanoComp

License

GPL / GPL-3.0-only

Recipe

/nanocomp/meta.yaml

package nanocomp

Versions

1.11.3-0,  1.11.2-0,  1.10.1-0,  1.10.0-0,  1.9.2-1,  1.9.2-0,  1.9.1-0,  1.9.0-0,  1.8.0-0, 

1.11.3-0,  1.11.2-0,  1.10.1-0,  1.10.0-0,  1.9.2-1,  1.9.2-0,  1.9.1-0,  1.9.0-0,  1.8.0-0,  1.7.0-0,  1.6.0-0,  1.1.0-1,  1.1.0-0,  1.0.0-0,  0.23.1-0,  0.23.0-1,  0.19.0-1,  0.19.0-0,  0.16.0-0,  0.15.0-0,  0.12.4-0,  0.7.0-0,  0.5.0-0

Depends

• joypy

• matplotlib-base >=2.1.0

• nanoget >=1.4.0

• nanomath >=0.23.1

• nanoplot >=1.21.0

• pandas

• plotly >=3.4.2

• psutil

• pyarrow

• python >=3

• seaborn >=0.9.0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install nanocomp

and update with:

conda update nanocomp

or use the docker container:

docker pull quay.io/biocontainers/nanocomp:<tag>

(see nanocomp/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/nanocomp/README.html)