recipe ncbi-ngs-sdk

NGS is a new, domain-specific API for accessing reads, alignments and pileups produced from Next Generation Sequencing.

Homepage

https://github.com/ncbi/ngs

License

Public Domain

Recipe

/ncbi-ngs-sdk/meta.yaml

package ncbi-ngs-sdk

Versions

2.10.4-0,  2.10.2-0,  2.10.1-0,  2.10.0-0,  2.9.3-0,  2.9.1-0,  2.9.0-0

Depends

• libgcc-ng >=7.3.0

• libiconv >=1.15,<1.16.0a0

• libstdcxx-ng >=7.3.0

• libxml2 >=2.9.10,<2.10.0a0

Required By

• sra-tools

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install ncbi-ngs-sdk

and update with:

conda update ncbi-ngs-sdk

or use the docker container:

docker pull quay.io/biocontainers/ncbi-ngs-sdk:<tag>

(see ncbi-ngs-sdk/tags for valid values for <tag>)

Link to this page

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