recipe novoalign

Powerful tool designed for mapping of short reads onto a reference genome from Illumina, Ion Torrent, and 454 NGS platforms

Homepage

http://www.novocraft.com/products/novoalign/

License

Commercial (requires license for commercial use or for features likes multi-threading)

Recipe

/novoalign/meta.yaml

Links

biotools: Novoalign

package novoalign

(downloads) docker_novoalign

Versions

3.09.00-2, 3.09.00-1, 3.09.00-0, 3.07.00-1, 3.07.00-0, 3.06.05-0, 3.04.04-3, 3.04.04-2, 3.04.04-0, 3.03.02-0

Depends
  • curl >=7.59.0,<8.0a0

  • libgcc-ng >=4.9

  • libstdcxx-ng >=4.9

  • zlib >=1.2.11,<1.3.0a0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install novoalign

and update with:

conda update novoalign

or use the docker container:

docker pull quay.io/biocontainers/novoalign:<tag>

(see novoalign/tags for valid values for <tag>)

Notes

Novoalign runs in single-threaded mode by default unless a “novoalign.lic” license file is provided in the same directory as its binaries. The license file can be copied in to the conda environment via the “novoalign-license-register” command.