recipe novobreak

local assembly for breakpoint detection in cancer genomes

Homepage

https://github.com/czc/nb_distribution

License

MIT

Recipe

/novobreak/meta.yaml

package novobreak

(downloads) docker_novobreak

Versions

1.1.3rc-61.1.3rc-51.1.3rc-41.1.3rc-31.1.3rc-21.1.3rc-11.1.3rc-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install novobreak

and update with:

conda update novobreak

or use the docker container:

docker pull quay.io/biocontainers/novobreak:<tag>

(see novobreak/tags for valid values for <tag>)

Notes

This package makes novobreak available via a wrapper in PATH, called `run_novobreak`, which takes all arguments of the run_novoBreak.sh script except the first, which is automatically inferred.