recipe ont-fast5-api

Oxford Nanopore Technologies fast5 API software

Homepage

https://github.com/nanoporetech/ont_fast5_api

License

MOZILLA / MPL-2.0

Recipe

/ont-fast5-api/meta.yaml

package ont-fast5-api

Versions

3.1.6-0,  3.1.5-0,  3.1.4-0,  3.1.3-2,  3.1.3-1,  3.1.3-0,  3.0.1-0,  3.0.0-0,  2.0.1-0, 

3.1.6-0,  3.1.5-0,  3.1.4-0,  3.1.3-2,  3.1.3-1,  3.1.3-0,  3.0.1-0,  3.0.0-0,  2.0.1-0,  2.0.0-0,  1.4.8-1,  1.4.8-0,  1.4.7-0,  1.4.4-0,  1.4.3-0,  1.4.0-0,  1.3.0-0,  1.2.0-0,  1.1.0-0,  1.0.1-1,  1.0.1-0,  0.4.1-1,  0.4.1-0

Depends

• h5py >=2.6

• hdf5

• numpy >=1.11

• packaging

• progressbar33 >=2.3.1

• python >=3

• six >=1.9

• tar

• zstd

Required By

• megalodon

• pore-c

• medaka

• fast5seek

• taeper

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install ont-fast5-api

and update with:

conda update ont-fast5-api

or use the docker container:

docker pull quay.io/biocontainers/ont-fast5-api:<tag>

(see ont-fast5-api/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/ont-fast5-api/README.html)