recipe ont-fast5-api

Oxford Nanopore Technologies fast5 API software

Homepage

https://github.com/nanoporetech/ont_fast5_api

License

OTHER / Mozilla Public 2.0 (MPL 2.0)

Recipe

/ont-fast5-api/meta.yaml

package ont-fast5-api

Versions

3.0.1-0, 3.0.0-0, 2.0.1-0, 2.0.0-0, 1.4.8-1, 1.4.8-0, 1.4.7-0, 1.4.4-0, 1.4.3-0, 1.4.0-0, 1.3.0-0, 1.2.0-0, 1.1.0-0, 1.0.1-1, 1.0.1-0, 0.4.1-1, 0.4.1-0

Depends

• h5py >=2.2.1

• numpy >=1.8.1

• progressbar33 >=2.3.1

• python

• six >=1.9

Required By

• megalodon

• taeper

• fast5seek

• medaka

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install ont-fast5-api

and update with:

conda update ont-fast5-api

or use the docker container:

docker pull quay.io/biocontainers/ont-fast5-api:<tag>

(see ont-fast5-api/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/ont-fast5-api/README.html)