recipe parsnp

Parsnp is a command-line-tool for efficient microbial core genome alignment and SNP detection.

Homepage:

https://github.com/marbl/parsnp

License:

custom; see https://raw.githubusercontent.com/marbl/parsnp/master/LICENSE

Recipe:

/parsnp/meta.yaml

package parsnp

(downloads) docker_parsnp

Versions:
1.7.4-11.7.4-01.7.3-01.7.2-01.7.1-11.7.1-01.7.0-01.6.2-11.6.2-0

1.7.4-11.7.4-01.7.3-01.7.2-01.7.1-11.7.1-01.7.0-01.6.2-11.6.2-01.6.1-11.6.1-01.6.0-01.5.6-11.5.6-01.5.4-11.5.4-01.5.3-01.5.2-11.5.2-01.5.1-01.5.0-41.5.0-31.5.0-21.5.0-11.5.0-01.2-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install parsnp

and update with:

conda update parsnp

or use the docker container:

docker pull quay.io/biocontainers/parsnp:<tag>

(see parsnp/tags for valid values for <tag>)

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