recipe pbmm2

A minimap2 frontend for PacBio native data formats

Homepage

https://github.com/PacificBiosciences/pbmm2

License

BSD-3-Clause-Clear

Recipe

/pbmm2/meta.yaml

package pbmm2

(downloads) docker_pbmm2

Versions

1.0.0-0, 0.12.0-0, 0.11.0-0, 0.10.1-1, 0.10.1-0, 0.10.0-0, 0.9.0-0, 0.8.1-0, 0.7.0-0, 0.6.0-0, 0.5.1-0

Depends libgcc-ng

>=7.3.0

Depends libstdcxx-ng

>=7.3.0

Depends pbbam

0.23.0.*

Depends pbcopper

0.4.2.*

Depends zlib

>=1.2.11,<1.3.0a0

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install pbmm2

and update with:

conda update pbmm2

or use the docker container:

docker pull quay.io/biocontainers/pbmm2:<tag>

(see pbmm2/tags for valid values for <tag>)