- recipe perl-obogaf-parser
a perl5 module to handle obo and gaf file
- Homepage:
- Documentation:
- Developer docs:
- License:
perl_5
- Recipe:
[](https://obogaf-parser.readthedocs.io/en/latest/?badge=latest)
obogaf-parser is a perl5 module specifically designed to handle GO and HPO obo file and their gene annotation file (gaf). However, obogaf-parser can be safely used to parse any obo file listed in OBO foundry website and any gaf file structured as those shown in GOA and HPO website (i.e. a csv file using tab as separator).
- package perl-obogaf-parser¶
-
- Versions:
1.373-2
,1.373-1
,1.373-0
,1.272-0
,1.271-0
,1.016-0
- Depends:
perl
>=5.32.1,<6.0a0 *_perl5
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install perl-obogaf-parser
and update with:
conda update perl-obogaf-parser
or use the docker container:
docker pull quay.io/biocontainers/perl-obogaf-parser:<tag>
(see perl-obogaf-parser/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/perl-obogaf-parser/README.html)