recipe phanotate

Phanotate gene caller for phages

Homepage:

https://github.com/deprekate/PHANOTATE

Documentation:

https://github.com/deprekate/PHANOTATE/blob/master/README.md

License:

GPL3 / GPL-3.0-only

Recipe:

/phanotate/meta.yaml

Links:

doi: 10.1093/bioinformatics

package phanotate

Versions:

1.5.1-1,  1.5.1-0,  1.5.0-2,  1.5.0-1,  1.5.0-0

Depends:

• backports.tempfile

• fastpath

• libgcc-ng >=12

• libstdcxx-ng >=12

• matplotlib-base

• python_abi 3.10.* *_cp310

• scipy

• seaborn

• setuptools

• statsmodels

• textwrap3

• trnascan-se

Required By:

• pharokka

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install phanotate

and update with:

conda update phanotate

or use the docker container:

docker pull quay.io/biocontainers/phanotate:<tag>

(see phanotate/tags for valid values for <tag>)

Download stats

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