recipe phantompeakqualtools

This package computes informative enrichment and quality measures for ChIP-seq/DNase-seq/FAIRE-seq/MNase-seq data. It can also be used to obtain robust estimates of the predominant fragment length or characteristic tag shift values in these assays.

Homepage

https://github.com/kundajelab/phantompeakqualtools

License

BSD-3-Clause

Recipe

/phantompeakqualtools/meta.yaml

Links

doi: 10.1101/gr.136184.111, doi: 10.1038/nbt.1508

package phantompeakqualtools

(downloads) docker_phantompeakqualtools

Versions

1.2-1, 1.2-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install phantompeakqualtools

and update with:

conda update phantompeakqualtools

or use the docker container:

docker pull quay.io/biocontainers/phantompeakqualtools:<tag>

(see phantompeakqualtools/tags for valid values for <tag>)