recipe picrust2

PICRUSt: Phylogenetic Investigation of Communities by Reconstruction of Unobserved States

Homepage

https://github.com/picrust/picrust2

License

GNU General Public License v3.0

Recipe

/picrust2/meta.yaml

package picrust2

(downloads) docker_picrust2

Versions

2.1.4_b-0, 2.1.3_b-0, 2.1.2_b-0, 2.1.1_b-0, 2.1.0_b-0, 2.0.3_b-0

Depends biom-format

2.1.7.*

Depends epa-ng

0.3.5.*

Depends gappa

0.2.0.*

Depends glpk

4.65.*

Depends h5py

2.9.0.*

Depends hmmer

3.2.1.*

Depends joblib

0.13.1.*

Depends numpy

1.16.3.*

Depends pandas

0.24.2.*

Depends pytest

4.4.1.*

Depends pytest-cov

2.6.1.*

Depends python

>=3.5,<3.7

Depends r-base

3.5.1.*

Depends r-castor

1.3.6.*

Depends scipy

1.2.1.*

Depends wget

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install picrust2

and update with:

conda update picrust2

or use the docker container:

docker pull quay.io/biocontainers/picrust2:<tag>

(see picrust2/tags for valid values for <tag>)