- recipe pindel
Pindel can detect breakpoints of large deletions, medium sized insertions, inversions, tandem duplications and other structural variants at single-based resolution from next-gen sequence data
- Homepage:
- License:
GPLv3
- Recipe:
- Links:
biotools: pindel
- package pindel¶
-
- Versions:
0.2.5b9-8
,0.2.5b9-7
,0.2.5b9-6
,0.2.5b9-5
,0.2.5b9-4
,0.2.5b9-3
,0.2.5b9-2
,0.2.5b9-1
,0.2.5b9-0
,0.2.5b9-8
,0.2.5b9-7
,0.2.5b9-6
,0.2.5b9-5
,0.2.5b9-4
,0.2.5b9-3
,0.2.5b9-2
,0.2.5b9-1
,0.2.5b9-0
,0.2.5b8-2
- Depends:
htslib
>=1.16,<1.17.0a0
libgcc-ng
>=12
libstdcxx-ng
>=12
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install pindel
and update with:
conda update pindel
or use the docker container:
docker pull quay.io/biocontainers/pindel:<tag>
(see pindel/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/pindel/README.html)