recipe platypus-variant

A Haplotype-Based Variant Caller For Next Generation Sequence Data

Homepage

http://www.well.ox.ac.uk/platypus

License

GPLv3

Recipe

/platypus-variant/meta.yaml

package platypus-variant

Versions

0.8.1.2-2,  0.8.1.2-1,  0.8.1.2-0,  0.8.1.1-3,  0.8.1.1-2,  0.8.1.1-1,  0.8.1.1-0,  0.8.1-1,  0.8.1-0

Depends

• htslib >=1.12,<1.13.0a0

• libgcc-ng >=9.3.0

• python >=2.7,<2.8.0a0

• python_abi 2.7.* *_cp27mu

Required By

• xyalign

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install platypus-variant

and update with:

conda update platypus-variant

or use the docker container:

docker pull quay.io/biocontainers/platypus-variant:<tag>

(see platypus-variant/tags for valid values for <tag>)

Link to this page

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