pplacer

downloads

Pplacer places query sequences on a fixed reference phylogenetic tree to maximize phylogenetic likelihood or posterior probability according to a reference alignment.

Home http://matsen.fredhutch.org/pplacer/
Versions 1.1.alpha17, 1.1.alpha19
License GPL-3.0
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/pplacer
Development https://github.com/matsen/pplacer/

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install pplacer

and update with:

conda update pplacer

docker

A Docker container is available at https://quay.io/repository/biocontainers/pplacer.