recipe proteinortho

Proteinortho is a tool to detect orthologous genes within different species.

Homepage:

https://gitlab.com/paulklemm_PHD/proteinortho/

License:

GPL / GPL-3.0-only

Recipe:

/proteinortho/meta.yaml

package proteinortho

Versions:

6.2.2-0,  6.2.1-0,  6.2.0-0,  6.1.7-0,  6.1.6-0,  6.1.5-0,  6.1.4-0,  6.1.3-0,  6.1.2-0, 

6.2.2-0,  6.2.1-0,  6.2.0-0,  6.1.7-0,  6.1.6-0,  6.1.5-0,  6.1.4-0,  6.1.3-0,  6.1.2-0,  6.1.1-1,  6.1.1-0,  6.1.0-2,  6.1.0-1,  6.1.0-0,  6.0.35-0,  6.0.34-0,  6.0.33-1,  6.0.33-0,  6.0.32-0,  6.0.31-0,  6.0.30-0,  6.0.29-1,  6.0.29-0,  6.0.28-1,  6.0.28-0,  6.0.27-0,  6.0.26-0,  6.0.25-0,  6.0.24-0,  6.0.23-0,  6.0.22-0,  6.0.21-0,  6.0.20-0,  6.0.19-0,  6.0.18-1,  6.0.18-0,  6.0.17-0,  6.0.16-1,  6.0.16-0,  6.0.15-0,  6.0.14-0,  6.0.13-0,  6.0.12-0,  6.0.11-0,  6.0.10-0,  6.0.9-0,  6.0.8-0,  6.0.7-0,  6.0.6-0,  6.0.5-0,  6.0.4-0,  6.0.3-0,  6.0.2c-0,  6.0.1-0,  6.0-0,  6.0b-0

Depends:

• _openmp_mutex >=4.5

• blis

• diamond >=0.9.29

• libgcc-ng >=12

• libgfortran-ng

• libgfortran5 >=10.4.0

• liblapack >=3.9.0,<4.0a0

• libstdcxx-ng >=12

• perl

• python

Required By:

• funannotate

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install proteinortho

and update with:

conda update proteinortho

or use the docker container:

docker pull quay.io/biocontainers/proteinortho:<tag>

(see proteinortho/tags for valid values for <tag>)

Download stats

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