recipe pybigwig

A python extension written in C for quick access to bigWig files.

Homepage:

https://github.com/dpryan79/pyBigWig

License:

MIT

Recipe:

/pybigwig/meta.yaml

package pybigwig

Versions:

0.3.22-0,  0.3.18-3,  0.3.18-2,  0.3.18-1,  0.3.18-0,  0.3.17-2,  0.3.17-1,  0.3.17-0,  0.3.16-0, 

0.3.22-0,  0.3.18-3,  0.3.18-2,  0.3.18-1,  0.3.18-0,  0.3.17-2,  0.3.17-1,  0.3.17-0,  0.3.16-0,  0.3.15-0,  0.3.14-0,  0.3.13-2,  0.3.13-1,  0.3.13-0,  0.3.12-2,  0.3.12-1,  0.3.12-0,  0.3.11-2,  0.3.11-1,  0.3.11-0,  0.3.10-0,  0.3.9-0,  0.3.8-0,  0.3.7-0,  0.3.6-1,  0.3.6-0,  0.3.5-0,  0.3.4-0,  0.3.3-0,  0.2.8-0,  0.2.7-0,  0.2.6-0,  0.2.5-0,  0.2.4-0,  0.2.3-0,  0.2.1b-1,  0.2.1b-0,  0.1.11-1,  0.1.11-0

Depends:

• libcurl >=7.88.1,<8.0a0

• libgcc-ng >=12

• libzlib >=1.2.13,<1.3.0a0

• numpy >=1.21.6,<2.0a0

• python >=3.10,<3.11.0a0

• python_abi 3.10.* *_cp310

• zlib >=1.2.13,<1.3.0a0

Required By:

• rseqc

• bioconvert

• seqchromloader

• motifraptor

• moca

• hicexplorer

• tobias

• deeptools

• biofluff

• sashimi-py

• trackplot

• pygenometracks

• riboraptor

• rgt

• popera

• genomic_regions

• crossmap

• basenji

• bwread

• liquorice

• cgat-scripts

• epic

• genomelake

• ultraheatmap

• pygtftk

• chorus2

• cgat-apps

• pypints

• fanc

• yapc

• pybedgraph

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install pybigwig

and update with:

conda update pybigwig

or use the docker container:

docker pull quay.io/biocontainers/pybigwig:<tag>

(see pybigwig/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/pybigwig/README.html)