recipe pysamstats

A Python utility for calculating statistics against genome position based on sequence alignments from a SAM, BAM or CRAM file.

Homepage

https://github.com/alimanfoo/pysamstats

License

MIT

Recipe

/pysamstats/meta.yaml

Links

biotools: pysamstats

package pysamstats

(downloads) docker_pysamstats

Versions

1.1.2-1, 1.1.2-0, 1.0.1-2, 1.0.1-1, 1.0.1-0, 1.0.0-0, 0.24.3-0, 0.24.2-1, 0.24.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install pysamstats

and update with:

conda update pysamstats

or use the docker container:

docker pull quay.io/biocontainers/pysamstats:<tag>

(see pysamstats/tags for valid values for <tag>)