recipe r-cdseq

Estimate cell-type-specific gene expression profiles and sample-specific cell-type proportions simultaneously using bulk sequencing data. Kang et al. (2019) <doi:10.1371/journal.pcbi.1007510>.

Homepage:

https://github.com/omnideconv/CDSeq

License:

GPL / GPL-3

Recipe:

/r-cdseq/meta.yaml

Links:

doi: 10.1371/journal.pcbi.1007510

package r-cdseq

(downloads) docker_r-cdseq

Versions:

0-30-20-10-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install r-cdseq

and update with:

conda update r-cdseq

or use the docker container:

docker pull quay.io/biocontainers/r-cdseq:<tag>

(see r-cdseq/tags for valid values for <tag>)

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