recipe r-leidenbase

An R to C interface that runs the Leiden community detection algorithm to find a basic partition

Homepage:

https://cole-trapnell-lab.github.io/leidenbase/

License:

GPL2, GPL3, BSD

Recipe:

/r-leidenbase/meta.yaml

package r-leidenbase

Versions:

0.1.12-0,  0.1.3-3,  0.1.3-2,  0.1.3-1,  0.1.3-0,  0.1.0-3,  0.1.0-2,  0.1.0-1,  0.1.0-0

Depends:

• glpk >=5.0,<5.1.0a0

• gmp >=6.2.1,<7.0a0

• libblas >=3.9.0,<4.0a0

• libgcc-ng >=12

• libgfortran-ng

• libgfortran5 >=10.4.0

• liblapack >=3.9.0,<4.0a0

• libstdcxx-ng >=12

• libxml2 >=2.9.14,<2.10.0a0

• r-base >=4.2,<4.3.0a0

• r-igraph >=1.3.4

Required By:

• r-monocle3

• bioconductor-monocle

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install r-leidenbase

and update with:

conda update r-leidenbase

or use the docker container:

docker pull quay.io/biocontainers/r-leidenbase:<tag>

(see r-leidenbase/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

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