recipe r-pscbs

Segmentation of allele-specific DNA copy number data and detection of regions with abnormal copy number within each parental chromosome. Both tumor-normal paired and tumor-only analyses are supported.

Homepage

https://github.com/HenrikBengtsson/PSCBS

License

GPL3 / GPL (>= 2)

Recipe

/r-pscbs/meta.yaml

package r-pscbs

(downloads) docker_r-pscbs

Versions
0.65.0-30.65.0-20.65.0-10.65.0-00.64.0-20.64.0-10.64.0-00.63.0-00.61.0-0

0.65.0-30.65.0-20.65.0-10.65.0-00.64.0-20.64.0-10.64.0-00.63.0-00.61.0-00.60.3-00.60.0-20.60.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install r-pscbs

and update with:

conda update r-pscbs

or use the docker container:

docker pull quay.io/biocontainers/r-pscbs:<tag>

(see r-pscbs/tags for valid values for <tag>)