recipe r-shaman

The shaman package - sampling HiC contact matrices for a-parametric normalization

Homepage

https://tanaylab.bitbucket.io/shaman/index.html

License

GPL

Recipe

/r-shaman/meta.yaml

package r-shaman

(downloads) docker_r-shaman

Versions

2.0-0

Depends bioconductor-genomeinfodb

Depends bioconductor-gviz

Depends r-base

>=3.5.1,<3.5.2.0a0

Depends r-domc

Depends r-misha

Depends r-rann

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install r-shaman

and update with:

conda update r-shaman

or use the docker container:

docker pull quay.io/biocontainers/r-shaman:<tag>

(see r-shaman/tags for valid values for <tag>)