recipe racon

Ultrafast consensus module for raw de novo genome assembly of long uncorrected reads.

Homepage:

https://github.com/lbcb-sci/racon

License:

MIT

Recipe:

/racon/meta.yaml

package racon

Versions:

1.5.0-2,  1.5.0-1,  1.5.0-0,  1.4.20-2,  1.4.20-1,  1.4.20-0,  1.4.13-0,  1.4.12-0,  1.4.11-0, 

1.5.0-2,  1.5.0-1,  1.5.0-0,  1.4.20-2,  1.4.20-1,  1.4.20-0,  1.4.13-0,  1.4.12-0,  1.4.11-0,  1.4.10-0,  1.4.7-0,  1.4.3-0,  1.4.2-0,  1.4.0-0,  1.3.3-1,  1.3.2-1,  1.3.2-0,  1.3.1-5,  1.3.1-4,  1.3.1-1,  1.3.1-0,  1.3.0-1,  1.2.1-1,  1.2.0-1,  1.2.0-0,  1.1.0-0,  1.0.1-0,  1.0.0-1,  1.0.0-0,  0.5.0-2,  0.5.0-1,  0.5.0-0

Depends:

• libgcc-ng >=12

• libstdcxx-ng >=12

• libzlib >=1.2.13,<1.3.0a0

• python

• zlib

Required By:

• pomoxis

• pbipa

• msi

• milonga

• metaplatanus

• rnabloom

• irissv

• minipolish

• bttoxin_digger

• zga

• pb-assembly

• nanomonsv

• rebaler

• unicycler

• pecat

• dragonflye

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install racon

and update with:

conda update racon

or use the docker container:

docker pull quay.io/biocontainers/racon:<tag>

(see racon/tags for valid values for <tag>)

Download stats

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