recipe repeatscout

De novo identification of repeat families in large genomes.

Homepage

http://repeatscout.bioprojects.org

License

GPL

Recipe

/repeatscout/meta.yaml

package repeatscout

Versions

1.0.6-1,  1.0.6-0,  1.0.5-3,  1.0.5-2,  1.0.5-1,  1.0.5-0

Depends

• libgcc-ng >=7.3.0

• nseg

• perl

• perl-file-temp

• perl-file-which

• trf

Required By

• repeatmodeler

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install repeatscout

and update with:

conda update repeatscout

or use the docker container:

docker pull quay.io/biocontainers/repeatscout:<tag>

(see repeatscout/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/repeatscout/README.html)