recipe ribotricer

Python package to detect translating ORF from Ribo-seq data

Homepage

https://github.com/smithlabcode/ribotricer

License

GPL3 / GNU General Public v3 (GPLv3)

Recipe

/ribotricer/meta.yaml

Ribotricer is a method for detecting actively-translating ORFs by directly leveraging the three-nucleotide periodicity of Ribo-seq data. It accurately identifies both short and long active ORFs.

package ribotricer

(downloads) docker_ribotricer

Versions

1.3.2-0, 1.3.1-0, 1.3.0-0, 1.2.0-0, 1.1.1-0, 1.1.0-0, 1.0.3-0, 1.0.2-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install ribotricer

and update with:

conda update ribotricer

or use the docker container:

docker pull quay.io/biocontainers/ribotricer:<tag>

(see ribotricer/tags for valid values for <tag>)