recipe rnabloom

Java tool for RNA-seq assembly

Homepage

https://github.com/bcgsc/RNA-Bloom

Documentation

https://github.com/bcgsc/RNA-Bloom/blob/master/README.md

License

GPL-3.0

Recipe

/rnabloom/meta.yaml

RNA-Bloom is a lightweight reference-free transcript sequence assembly tool for short reads and nanopore reads.

package rnabloom

(downloads) docker_rnabloom

Versions

1.3.1-01.3.0-01.2.3-01.2.2-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install rnabloom

and update with:

conda update rnabloom

or use the docker container:

docker pull quay.io/biocontainers/rnabloom:<tag>

(see rnabloom/tags for valid values for <tag>)