saffrontree

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SaffronTree: Reference free rapid phylogenetic tree construction from raw read data

Home https://github.com/sanger-pathogens/saffrontree
Versions 0.1.2
License GNU General Public License v3 (GPLv3)
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/saffrontree

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install saffrontree

and update with:

conda update saffrontree

docker

A Docker container is available at https://quay.io/repository/biocontainers/saffrontree.