recipe samblaster

Mark duplicates in and extract discordant and split reads from SAM files.

Homepage

https://github.com/GregoryFaust/samblaster

License

MIT

Recipe

/samblaster/meta.yaml

package samblaster

(downloads) docker_samblaster

Versions

0.1.26-00.1.25-00.1.24-30.1.24-20.1.24-10.1.24-00.1.23-00.1.22-00.1.20-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install samblaster

and update with:

conda update samblaster

or use the docker container:

docker pull quay.io/biocontainers/samblaster:<tag>

(see samblaster/tags for valid values for <tag>)