recipe samblaster

A tool to mark duplicates and extract discordant and split reads from sam files.

Homepage:https://github.com/GregoryFaust/samblaster
License:MIT
Recipe:/samblaster/meta.yaml
package samblaster

(downloads) docker_samblaster

Versions:

0.1.24-1, 0.1.24-0, 0.1.23-0, 0.1.22-0

Depends:
  • libstdcxx-ng >=4.9
Required By:

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install samblaster

and update with:

conda update samblaster

or use the docker container:

docker pull quay.io/biocontainers/samblaster:<tag>

(see samblaster/tags for valid values for <tag>)