recipe schavott

Assembly and scaffolding of bacterial genomes in real time using MinION-sequencing.

Homepage

http://github.com/emilhaegglund/schavott

License

MIT

Recipe

/schavott/meta.yaml

package schavott

Versions

0.5.0-2,  0.5.0-1,  0.5.0-0,  0.4.1-0,  0.3-0,  0.2-0

Depends

• bokeh

• h5py >=2.2.0

• numpy

• pyfasta

• python

• watchdog >=0.8.3

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install schavott

and update with:

conda update schavott

or use the docker container:

docker pull quay.io/biocontainers/schavott:<tag>

(see schavott/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/schavott/README.html)