recipe segtools

a python package for analyzing genomic segmentations

Homepage

http://segtools.hoffmanlab.org/

License

GPL2

Recipe

/segtools/meta.yaml

package segtools

(downloads) docker_segtools

Versions

1.2.1-2, 1.2.1-1, 1.2.1-0, 1.1.14-2, 1.1.14-1, 1.1.14-0

Depends genomedata

Depends gmtk

Depends graphviz

Depends numpy

Depends pygraphviz

Depends python

Depends r-base

>=3.5.1,<3.5.2.0a0

Depends r-cairo

Depends r-cluster

Depends r-latticeextra

Depends r-reshape2

Depends rpy2

>=2.6.0

Depends textinput

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install segtools

and update with:

conda update segtools

or use the docker container:

docker pull quay.io/biocontainers/segtools:<tag>

(see segtools/tags for valid values for <tag>)

Link to this page

Render an install-with-bioconda badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/segtools/README.html)