recipe snippy

Rapid bacterial SNP calling and core genome alignments

Homepage

https://github.com/tseemann/snippy

License

GPL / GPL-2.0

Recipe

/snippy/meta.yaml

Links

biotools: snippy

package snippy

(downloads) docker_snippy

Versions

4.3.6-0, 4.3.5-0, 4.3.3-0, 4.2.3-0, 4.1.0-0, 4.0.7-0, 4.0.5-0, 4.0.2-0, 3.2-1, 3.1-4, 3.1-3, 3.1-2, 3.1-1, 3.1-0, 3.0-1, 3.0-0, 2.9-1, 2.9-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install snippy

and update with:

conda update snippy

or use the docker container:

docker pull quay.io/biocontainers/snippy:<tag>

(see snippy/tags for valid values for <tag>)