recipe snippy

Rapid bacterial SNP calling and core genome alignments

Homepage

https://github.com/tseemann/snippy

License

GPL / GPL-2.0

Recipe

/snippy/meta.yaml

Links

biotools: snippy

package snippy

(downloads) docker_snippy

Versions
4.6.0-04.5.1-04.5.0-04.4.5-14.4.5-04.4.3-14.4.3-04.4.1-04.4.0-2

4.6.0-04.5.1-04.5.0-04.4.5-14.4.5-04.4.3-14.4.3-04.4.1-04.4.0-24.4.0-14.4.0-04.3.6-04.3.5-04.3.3-04.2.3-04.1.0-04.0.7-04.0.5-04.0.2-03.2-13.1-43.1-33.1-23.1-13.1-03.0-13.0-02.9-12.9-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install snippy

and update with:

conda update snippy

or use the docker container:

docker pull quay.io/biocontainers/snippy:<tag>

(see snippy/tags for valid values for <tag>)