recipe soapdenovo-trans

SOAPdenovo-Trans is a de novo transcriptome assembler basing on the SOAPdenovo framework, adapt to alternative splicing and different expression level among transcripts.

Homepage

http://soap.genomics.org.cn/SOAPdenovo-Trans.html

License

GPLv3

Recipe

/soapdenovo-trans/meta.yaml

package soapdenovo-trans

(downloads) docker_soapdenovo-trans

Versions

1.04-41.04-31.04-21.04-11.04-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install soapdenovo-trans

and update with:

conda update soapdenovo-trans

or use the docker container:

docker pull quay.io/biocontainers/soapdenovo-trans:<tag>

(see soapdenovo-trans/tags for valid values for <tag>)