recipe swarm

A robust and fast clustering method for amplicon-based studies.

Homepage

https://github.com/torognes/swarm

License

Affero GPL

Recipe

/swarm/meta.yaml

Links

biotools: swarm, doi: 10.7717/peerj.593

package swarm

(downloads) docker_swarm

Versions

2.2.2-2, 2.2.2-1, 2.2.2-0, 2.1.13-0, 2.1.10-0, 2.1.5-0, 1.2.19-1, 1.2.19-0

Depends libgcc-ng

>=7.3.0

Depends libstdcxx-ng

>=7.3.0

Depends python

Depends python-igraph

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install swarm

and update with:

conda update swarm

or use the docker container:

docker pull quay.io/biocontainers/swarm:<tag>

(see swarm/tags for valid values for <tag>)

Link to this page

Render an install-with-bioconda badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/swarm/README.html)