recipe tabixpp

This is a C++ wrapper around tabix project which abstracts some of the details of opening and jumping in tabix-indexed files.

Homepage

https://github.com/ekg/tabixpp

License

MIT / MIT

Recipe

/tabixpp/meta.yaml

Links

biotools: tabixpp

package tabixpp

Versions

1.1.0-6,  1.1.0-5,  1.1.0-4,  1.1.0-3,  1.1.0-2,  1.1.0-1,  1.1.0-0

Depends

• bc

• bzip2 >=1.0.8,<2.0a0

• htslib >=1.12,<1.13.0a0

• libgcc-ng >=9.3.0

• libstdcxx-ng >=9.3.0

• samtools

• xz >=5.2.5,<5.3.0a0

• zlib >=1.2.11,<1.3.0a0

Required By

• freebayes

• vcflib

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install tabixpp

and update with:

conda update tabixpp

or use the docker container:

docker pull quay.io/biocontainers/tabixpp:<tag>

(see tabixpp/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/tabixpp/README.html)