recipe tb-profiler

Profiling tool for Mycobacterium tuberculosis to detect drug resistance and lineage from WGS data

Homepage

https://github.com/jodyphelan/TBProfiler

License

GPL3

Recipe

/tb-profiler/meta.yaml

Links

doi: 10.1186/s13073-019-0650-x

package tb-profiler

(downloads) docker_tb-profiler

Versions
2.8.12-22.8.12-12.8.12-02.8.11-02.8.10-02.8.9-02.8.8-02.8.6-02.8.5-0

2.8.12-22.8.12-12.8.12-02.8.11-02.8.10-02.8.9-02.8.8-02.8.6-02.8.5-02.8.4-02.8.3-02.8.2-02.8.1-02.8.0-12.8.0-02.7.4-02.7.3-02.7.2-02.7.1-02.7-02.6.1-22.6.1-12.6.1-02.6-02.5-12.5-02.4-02.3-02.2-12.2-02.1-22.1-12.1-02.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install tb-profiler

and update with:

conda update tb-profiler

or use the docker container:

docker pull quay.io/biocontainers/tb-profiler:<tag>

(see tb-profiler/tags for valid values for <tag>)