recipe trawler

Trawler is a motif discovery tool used to identify enriched motifs in a set of sequenced regions of DNA.

Homepage

https://trawler.erc.monash.edu.au/help.html

License

GPLv2

Recipe

/trawler/meta.yaml

package trawler

(downloads) docker_trawler

Versions

2.0-2, 2.0-1, 2.0-0

Depends ghostscript

Depends openjdk

Depends perl

>=5.26.2,<5.27.0a0

Depends perl-algorithm-cluster

Depends perl-cgi

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install trawler

and update with:

conda update trawler

or use the docker container:

docker pull quay.io/biocontainers/trawler:<tag>

(see trawler/tags for valid values for <tag>)