recipe trimmomatic

A flexible read trimming tool for Illumina NGS data

Homepage

http://www.usadellab.org/cms/?page=trimmomatic

License

GPLv3

Recipe

/trimmomatic/meta.yaml

Links

biotools: trimmomatic, doi: 10.1093/bioinformatics/btu170

package trimmomatic

(downloads) docker_trimmomatic

Versions
0.39-10.39-00.38-10.38-00.36-60.36-50.36-40.36-30.36-1

0.39-10.39-00.38-10.38-00.36-60.36-50.36-40.36-30.36-10.35-60.35-40.35-30.35-20.35-10.33-20.33-10.33-00.32-30.32-20.32-10.32-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install trimmomatic

and update with:

conda update trimmomatic

or use the docker container:

docker pull quay.io/biocontainers/trimmomatic:<tag>

(see trimmomatic/tags for valid values for <tag>)