recipe trinity

Trinity assembles transcript sequences from Illumina RNA-Seq data.

Homepage

https://github.com/trinityrnaseq/trinityrnaseq/

Documentation

https://github.com/trinityrnaseq/trinityrnaseq/wiki

License

BSD / BSD-3-Clause

Recipe

/trinity/meta.yaml

Links

biotools: trinity, doi: 10.1038/nbt.1883, usegalaxy-eu: trinity

package trinity

(downloads) docker_trinity

Versions
2.11.0-02.9.1-12.9.1-02.8.5-52.8.5-42.8.5-32.8.5-22.8.5-12.8.5-0

2.11.0-02.9.1-12.9.1-02.8.5-52.8.5-42.8.5-32.8.5-22.8.5-12.8.5-02.8.4-12.8.4-02.8.3-02.8.2-22.8.2-12.8.2-02.6.6-22.6.6-12.6.6-02.5.1-12.5.1-02.4.0-52.4.0-42.4.0-32.3.2-22.3.2-12.3.2-02.2.0-72.2.0-62.2.0-52.2.0-42.2.0-32.2.0-22.2.0-12.2.0-02.1.1-6date.2011_11_26-8date.2011_11_26-7date.2011_11_26-6date.2011_11_26-5date.2011_11_26-4date.2011_11_26-3

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install trinity

and update with:

conda update trinity

or use the docker container:

docker pull quay.io/biocontainers/trinity:<tag>

(see trinity/tags for valid values for <tag>)