recipe vsearch

a versatile open source tool for metagenomics (USEARCH alternative)

Homepage

https://github.com/torognes/vsearch

License

GPL / GPL-3.0-or-later OR BSD-2-Clause

Recipe

/vsearch/meta.yaml

Links

biotools: vsearch, doi: 10.7717/peerj.2584

package vsearch

(downloads) docker_vsearch

Versions
2.18.0-02.17.1-02.17.0-12.17.0-02.16.0-02.15.2-12.15.2-02.15.1-02.15.0-0

2.18.0-02.17.1-02.17.0-12.17.0-02.16.0-02.15.2-12.15.2-02.15.1-02.15.0-02.14.2-02.14.1-02.14.0-02.13.7-02.13.6-02.13.4-42.13.4-02.13.3-02.13.1-02.13.0-02.11.1-02.10.4-12.10.4-02.10.3-02.10.2-02.10.1-02.10.0-02.9.1-02.9.0-02.8.5-02.8.3-02.8.2-02.8.1-02.8.0-12.8.0-02.7.0-12.7.0-02.6.0-12.6.0-02.5.0-02.4.4-02.4.3-02.4.0-02.3.4-02.3.2-02.0.3-12.0.3-02.0.2-02.0.0-01.11.1-01.10.2-01.9.7-01.9.5-01.1.3-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install vsearch

and update with:

conda update vsearch

or use the docker container:

docker pull quay.io/biocontainers/vsearch:<tag>

(see vsearch/tags for valid values for <tag>)

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