- recipe vsearch
a versatile open source tool for metagenomics (USEARCH alternative)
- Homepage:
- License:
GPL / GPL-3.0-or-later OR BSD-2-Clause
- Recipe:
- Links:
biotools: vsearch, doi: 10.7717/peerj.2584
- package vsearch¶
-
- Versions:
2.22.1-2
,2.22.1-1
,2.22.1-0
,2.21.2-0
,2.21.1-1
,2.21.1-0
,2.21.0-0
,2.20.1-0
,2.20.0-0
,2.22.1-2
,2.22.1-1
,2.22.1-0
,2.21.2-0
,2.21.1-1
,2.21.1-0
,2.21.0-0
,2.20.1-0
,2.20.0-0
,2.19.0-0
,2.18.0-0
,2.17.1-0
,2.17.0-1
,2.17.0-0
,2.16.0-0
,2.15.2-1
,2.15.2-0
,2.15.1-0
,2.15.0-0
,2.14.2-0
,2.14.1-0
,2.14.0-0
,2.13.7-0
,2.13.6-0
,2.13.4-4
,2.13.4-0
,2.13.3-0
,2.13.1-0
,2.13.0-0
,2.11.1-0
,2.10.4-1
,2.10.4-0
,2.10.3-0
,2.10.2-0
,2.10.1-0
,2.10.0-0
,2.9.1-0
,2.9.0-0
,2.8.5-0
,2.8.3-0
,2.8.2-0
,2.8.1-0
,2.8.0-1
,2.8.0-0
,2.7.0-1
,2.7.0-0
,2.6.0-1
,2.6.0-0
,2.5.0-0
,2.4.4-0
,2.4.3-0
,2.4.0-0
,2.3.4-0
,2.3.2-0
,2.0.3-1
,2.0.3-0
,2.0.2-0
,2.0.0-0
,1.11.1-0
,1.10.2-0
,1.9.7-0
,1.9.5-0
,1.1.3-0
- Depends:
bzip2
>=1.0.8,<2.0a0
libgcc-ng
>=12
libstdcxx-ng
>=12
libzlib
>=1.2.13,<1.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install vsearch
and update with:
conda update vsearch
or use the docker container:
docker pull quay.io/biocontainers/vsearch:<tag>
(see vsearch/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/vsearch/README.html)