recipe wgs-assembler

Celera Assembler (wgs-assembler) is a de novo whole-genome shotgun (WGS) DNA sequence assembler

Homepage

http://wgs-assembler.sourceforge.net/wiki/index.php?title=Main_Page

License

MIT

Recipe

/wgs-assembler/meta.yaml

package wgs-assembler

Versions

8.3-0

Depends

• atac

• blasr

• estmapper

• falcon

• jellyfish

• libgcc

• meryl

• pbdagcon

• perl 5.22.0*

• samtools

• sim4db

Required By

• sprai

• intemap

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install wgs-assembler

and update with:

conda update wgs-assembler

or use the docker container:

docker pull quay.io/biocontainers/wgs-assembler:<tag>

(see wgs-assembler/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/wgs-assembler/README.html)